Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC24.05■■□□□ 1.44
MSH5O43196 MIR574-201ENST00000385209 96 ntBASIC24.05■■□□□ 1.44
MSH5O43196 LINC01697-204ENST00000458316 1122 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC24.05■■□□□ 1.44
MSH5O43196 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC24.05■■□□□ 1.44
MSH5O43196 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC24.05■■□□□ 1.44
MSH5O43196 IGHV3-41-201ENST00000613121 348 ntBASIC24.05■■□□□ 1.44
MSH5O43196 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC24.05■■□□□ 1.44
MSH5O43196 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
MSH5O43196 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
MSH5O43196 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC24.05■■□□□ 1.44
MSH5O43196 UBC-206ENST00000538617 1303 ntTSL 5 BASIC24.05■■□□□ 1.44
MSH5O43196 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSH5O43196 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC24.05■■□□□ 1.44
MSH5O43196 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.04■■□□□ 1.44
MSH5O43196 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
MSH5O43196 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC24.04■■□□□ 1.44
MSH5O43196 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
MSH5O43196 LINC00896-202ENST00000609602 2128 ntBASIC24.04■■□□□ 1.44
MSH5O43196 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC24.04■■□□□ 1.44
MSH5O43196 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 MTCYBP7-201ENST00000419540 1134 ntBASIC24.04■■□□□ 1.44
MSH5O43196 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC24.04■■□□□ 1.44
MSH5O43196 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC24.04■■□□□ 1.44
MSH5O43196 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC24.04■■□□□ 1.44
MSH5O43196 AC110760.3-202ENST00000515177 371 ntBASIC24.04■■□□□ 1.44
MSH5O43196 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC24.04■■□□□ 1.44
MSH5O43196 OR4A19P-201ENST00000533579 1103 ntBASIC24.04■■□□□ 1.44
MSH5O43196 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC24.04■■□□□ 1.44
MSH5O43196 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
MSH5O43196 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC24.04■■□□□ 1.44
MSH5O43196 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
MSH5O43196 AC007423.1-201ENST00000605009 627 ntBASIC24.04■■□□□ 1.44
MSH5O43196 AC025175.1-201ENST00000606482 759 ntBASIC24.04■■□□□ 1.44
MSH5O43196 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.04■■□□□ 1.44
MSH5O43196 AP002371.2-201ENST00000624450 503 ntBASIC24.04■■□□□ 1.44
MSH5O43196 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC24.04■■□□□ 1.44
MSH5O43196 ESPNP-201ENST00000270691 2015 ntBASIC24.04■■□□□ 1.44
MSH5O43196 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC24.04■■□□□ 1.44
MSH5O43196 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC24.04■■□□□ 1.44
MSH5O43196 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
MSH5O43196 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
MSH5O43196 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC24.03■■□□□ 1.44
MSH5O43196 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
MSH5O43196 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC24.03■■□□□ 1.44
MSH5O43196 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 Z83836.1-201ENST00000624605 1642 ntBASIC24.03■■□□□ 1.44
MSH5O43196 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
MSH5O43196 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC24.03■■□□□ 1.44
MSH5O43196 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 ANKRD26P4-201ENST00000455755 950 ntBASIC24.03■■□□□ 1.44
MSH5O43196 MTND1P22-201ENST00000510572 951 ntBASIC24.03■■□□□ 1.44
MSH5O43196 AC121161.1-201ENST00000510606 652 ntBASIC24.03■■□□□ 1.44
MSH5O43196 AC016737.1-201ENST00000605739 1068 ntBASIC24.03■■□□□ 1.44
MSH5O43196 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC24.03■■□□□ 1.44
MSH5O43196 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC24.03■■□□□ 1.44
MSH5O43196 AL163051.2-201ENST00000618976 735 ntBASIC24.03■■□□□ 1.44
MSH5O43196 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
MSH5O43196 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 STX6-204ENST00000542060 4809 ntTSL 2 BASIC24.03■■□□□ 1.44
MSH5O43196 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
MSH5O43196 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.02■■□□□ 1.44
MSH5O43196 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.02■■□□□ 1.44
MSH5O43196 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms