Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF113AO15541 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF113AO15541 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.04■□□□□ 0.96
RNF113AO15541 FAM197Y8-203ENST00000450145 560 ntBASIC21.04■□□□□ 0.96
RNF113AO15541 SIGLEC30P-201ENST00000455569 941 ntBASIC21.04■□□□□ 0.96
RNF113AO15541 AP002469.2-201ENST00000531724 424 ntBASIC21.04■□□□□ 0.96
RNF113AO15541 AC021087.4-201ENST00000563761 564 ntBASIC21.04■□□□□ 0.96
RNF113AO15541 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF113AO15541 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF113AO15541 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF113AO15541 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF113AO15541 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
RNF113AO15541 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF113AO15541 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RNF113AO15541 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF113AO15541 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF113AO15541 PCDHB18P-201ENST00000524813 2368 ntBASIC21.03■□□□□ 0.96
RNF113AO15541 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF113AO15541 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RNF113AO15541 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF113AO15541 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF113AO15541 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
RNF113AO15541 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RNF113AO15541 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF113AO15541 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF113AO15541 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF113AO15541 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF113AO15541 AL022326.1-202ENST00000641533 845 ntBASIC21.03■□□□□ 0.96
RNF113AO15541 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF113AO15541 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RNF113AO15541 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF113AO15541 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RNF113AO15541 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF113AO15541 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF113AO15541 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF113AO15541 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF113AO15541 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
RNF113AO15541 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RNF113AO15541 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RNF113AO15541 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF113AO15541 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF113AO15541 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF113AO15541 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF113AO15541 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF113AO15541 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF113AO15541 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.02■□□□□ 0.96
RNF113AO15541 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF113AO15541 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF113AO15541 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF113AO15541 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF113AO15541 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF113AO15541 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
RNF113AO15541 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
RNF113AO15541 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF113AO15541 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.02■□□□□ 0.95
RNF113AO15541 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF113AO15541 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
RNF113AO15541 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF113AO15541 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF113AO15541 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF113AO15541 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF113AO15541 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF113AO15541 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF113AO15541 AC005332.8-201ENST00000622750 2735 ntBASIC21.01■□□□□ 0.95
RNF113AO15541 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF113AO15541 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF113AO15541 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF113AO15541 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RNF113AO15541 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RNF113AO15541 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF113AO15541 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF113AO15541 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF113AO15541 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF113AO15541 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF113AO15541 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF113AO15541 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF113AO15541 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.01■□□□□ 0.95
RNF113AO15541 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms