Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDH17O14917 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDH17O14917 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH17O14917 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PCDH17O14917 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
PCDH17O14917 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH17O14917 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDH17O14917 SAPCD2P3-201ENST00000455031 850 ntBASIC16.79■□□□□ 0.28
PCDH17O14917 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDH17O14917 AC112698.1-201ENST00000510299 916 ntBASIC16.79■□□□□ 0.28
PCDH17O14917 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH17O14917 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDH17O14917 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDH17O14917 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH17O14917 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.79■□□□□ 0.28
PCDH17O14917 AL732292.2-201ENST00000609649 430 ntBASIC16.79■□□□□ 0.28
PCDH17O14917 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDH17O14917 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH17O14917 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH17O14917 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PCDH17O14917 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH17O14917 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH17O14917 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDH17O14917 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH17O14917 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH17O14917 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH17O14917 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH17O14917 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PCDH17O14917 AC141586.5-201ENST00000624546 2050 ntBASIC16.78■□□□□ 0.28
PCDH17O14917 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDH17O14917 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH17O14917 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH17O14917 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 NUS1P2-201ENST00000417358 873 ntBASIC16.78■□□□□ 0.28
PCDH17O14917 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH17O14917 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH17O14917 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH17O14917 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH17O14917 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.78■□□□□ 0.28
PCDH17O14917 AL591684.3-201ENST00000605187 298 ntBASIC16.78■□□□□ 0.28
PCDH17O14917 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH17O14917 AC099398.1-201ENST00000567919 2776 ntBASIC16.78■□□□□ 0.28
PCDH17O14917 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDH17O14917 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDH17O14917 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 AC125634.1-201ENST00000438758 1403 ntBASIC16.78■□□□□ 0.28
PCDH17O14917 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH17O14917 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH17O14917 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH17O14917 AC093010.1-201ENST00000473625 1624 ntBASIC16.78■□□□□ 0.28
PCDH17O14917 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
PCDH17O14917 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH17O14917 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH17O14917 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH17O14917 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH17O14917 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH17O14917 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH17O14917 AC091607.1-201ENST00000490318 1060 ntBASIC16.77■□□□□ 0.28
PCDH17O14917 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH17O14917 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH17O14917 AC096582.2-201ENST00000510860 516 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms