Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC24.13■■□□□ 1.45
CHD2O14647 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD2O14647 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD2O14647 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CHD2O14647 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD2O14647 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CHD2O14647 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CHD2O14647 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 AC241585.1-201ENST00000433527 519 ntBASIC24.12■■□□□ 1.45
CHD2O14647 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC24.12■■□□□ 1.45
CHD2O14647 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CHD2O14647 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC24.12■■□□□ 1.45
CHD2O14647 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC24.12■■□□□ 1.45
CHD2O14647 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC24.12■■□□□ 1.45
CHD2O14647 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC24.12■■□□□ 1.45
CHD2O14647 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 HMGA1P7-201ENST00000406908 502 ntBASIC24.12■■□□□ 1.45
CHD2O14647 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC24.12■■□□□ 1.45
CHD2O14647 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC24.12■■□□□ 1.45
CHD2O14647 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC24.12■■□□□ 1.45
CHD2O14647 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC24.12■■□□□ 1.45
CHD2O14647 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD2O14647 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
CHD2O14647 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC24.11■■□□□ 1.45
CHD2O14647 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC24.11■■□□□ 1.45
CHD2O14647 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC24.11■■□□□ 1.45
CHD2O14647 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC24.11■■□□□ 1.45
CHD2O14647 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC24.11■■□□□ 1.45
CHD2O14647 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC24.11■■□□□ 1.45
CHD2O14647 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC24.11■■□□□ 1.45
CHD2O14647 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC24.11■■□□□ 1.45
CHD2O14647 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC24.11■■□□□ 1.45
CHD2O14647 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHD2O14647 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC24.11■■□□□ 1.45
CHD2O14647 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD2O14647 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC24.1■■□□□ 1.45
CHD2O14647 WASH6P-202ENST00000359512 1437 ntBASIC24.1■■□□□ 1.45
CHD2O14647 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CHD2O14647 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC24.1■■□□□ 1.45
CHD2O14647 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC24.1■■□□□ 1.45
CHD2O14647 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CHD2O14647 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC24.1■■□□□ 1.45
CHD2O14647 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC24.1■■□□□ 1.45
CHD2O14647 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC24.1■■□□□ 1.45
CHD2O14647 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC24.1■■□□□ 1.45
CHD2O14647 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC24.1■■□□□ 1.45
CHD2O14647 AC046185.3-201ENST00000623228 1824 ntBASIC24.1■■□□□ 1.45
CHD2O14647 AMT-250ENST00000637682 1823 ntTSL 5 BASIC24.1■■□□□ 1.45
CHD2O14647 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD2O14647 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD2O14647 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC24.1■■□□□ 1.45
CHD2O14647 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD2O14647 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC24.1■■□□□ 1.45
CHD2O14647 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC24.1■■□□□ 1.45
CHD2O14647 AL662799.1-202ENST00000614205 422 ntBASIC24.1■■□□□ 1.45
CHD2O14647 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CHD2O14647 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD2O14647 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CHD2O14647 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC24.09■■□□□ 1.45
CHD2O14647 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC24.09■■□□□ 1.45
CHD2O14647 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC24.09■■□□□ 1.45
CHD2O14647 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC24.09■■□□□ 1.45
CHD2O14647 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC24.09■■□□□ 1.45
CHD2O14647 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC24.09■■□□□ 1.45
CHD2O14647 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC24.09■■□□□ 1.45
CHD2O14647 AC009118.2-201ENST00000613275 655 ntBASIC24.09■■□□□ 1.45
CHD2O14647 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHD2O14647 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC24.09■■□□□ 1.45
CHD2O14647 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC24.09■■□□□ 1.45
CHD2O14647 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC24.09■■□□□ 1.45
CHD2O14647 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms