Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CLDN5O00501 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN5O00501 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CLDN5O00501 AC009336.1-201ENST00000608941 1553 ntBASIC18.51■□□□□ 0.55
CLDN5O00501 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN5O00501 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN5O00501 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLDN5O00501 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN5O00501 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN5O00501 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN5O00501 OR7E14P-202ENST00000530490 1290 ntBASIC18.5■□□□□ 0.55
CLDN5O00501 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN5O00501 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN5O00501 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN5O00501 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 AC243591.1-201ENST00000452967 1364 ntBASIC18.5■□□□□ 0.55
CLDN5O00501 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLDN5O00501 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN5O00501 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CLDN5O00501 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CLDN5O00501 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLDN5O00501 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN5O00501 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN5O00501 HLA-J-201ENST00000462773 1622 ntBASIC18.49■□□□□ 0.55
CLDN5O00501 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLDN5O00501 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.49■□□□□ 0.55
CLDN5O00501 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CLDN5O00501 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.49■□□□□ 0.55
CLDN5O00501 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.49■□□□□ 0.55
CLDN5O00501 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.49■□□□□ 0.55
CLDN5O00501 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CLDN5O00501 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLDN5O00501 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.49■□□□□ 0.55
CLDN5O00501 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLDN5O00501 FZD10-202ENST00000539839 3282 ntBASIC18.49■□□□□ 0.55
CLDN5O00501 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN5O00501 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN5O00501 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN5O00501 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN5O00501 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLDN5O00501 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CLDN5O00501 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CLDN5O00501 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN5O00501 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CLDN5O00501 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN5O00501 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CLDN5O00501 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLDN5O00501 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN5O00501 MYCLP1-201ENST00000372451 1075 ntBASIC18.48■□□□□ 0.55
CLDN5O00501 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLDN5O00501 AP000347.1-202ENST00000435868 847 ntBASIC18.48■□□□□ 0.55
CLDN5O00501 PRYP5-201ENST00000451909 266 ntBASIC18.48■□□□□ 0.55
CLDN5O00501 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN5O00501 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN5O00501 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN5O00501 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.48■□□□□ 0.55
CLDN5O00501 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms