Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC130371.2-201ENST00000619443 611 ntBASIC12.89□□□□□ -0.35
SMKR1H3BMG3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 AC009949.1-201ENST00000623048 1830 ntBASIC12.89□□□□□ -0.35
SMKR1H3BMG3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMKR1H3BMG3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 AL031985.4-201ENST00000642138 673 ntBASIC12.88□□□□□ -0.35
SMKR1H3BMG3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 AC092171.3-201ENST00000610122 2651 ntBASIC12.88□□□□□ -0.35
SMKR1H3BMG3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 AL662844.4-201ENST00000606367 2838 ntBASIC12.88□□□□□ -0.35
SMKR1H3BMG3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMKR1H3BMG3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 LINC01451-201ENST00000623792 534 ntBASIC12.87□□□□□ -0.35
SMKR1H3BMG3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms