Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
CFAP99D6REC4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CFAP99D6REC4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CFAP99D6REC4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CFAP99D6REC4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFAP99D6REC4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.55■□□□□ 0.4
CFAP99D6REC4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 AC012317.2-201ENST00000623305 2251 ntBASIC17.54■□□□□ 0.4
CFAP99D6REC4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 FAM220CP-201ENST00000395253 831 ntBASIC17.54■□□□□ 0.4
CFAP99D6REC4 IGHV3-47-201ENST00000425060 335 ntBASIC17.54■□□□□ 0.4
CFAP99D6REC4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 MIR3652-201ENST00000579335 131 ntBASIC17.54■□□□□ 0.4
CFAP99D6REC4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFAP99D6REC4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CFAP99D6REC4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 AC124067.4-201ENST00000519691 2379 ntBASIC17.53■□□□□ 0.4
CFAP99D6REC4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 COX5BP2-201ENST00000392354 334 ntBASIC17.53■□□□□ 0.4
CFAP99D6REC4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 POM121L3P-201ENST00000419331 1163 ntBASIC17.53■□□□□ 0.4
CFAP99D6REC4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 AC007967.3-201ENST00000434308 558 ntBASIC17.53■□□□□ 0.4
CFAP99D6REC4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 AC096582.2-201ENST00000510860 516 ntBASIC17.53■□□□□ 0.4
CFAP99D6REC4 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFAP99D6REC4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.53■□□□□ 0.4
CFAP99D6REC4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms