Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRIM49BA6NDI0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AC116353.5-201ENST00000638148 1699 ntBASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AC005332.1-201ENST00000577698 1310 ntBASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 SLC25A1P3-201ENST00000395415 828 ntBASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AC002558.1-201ENST00000488906 803 ntBASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 NTF6B-201ENST00000591913 560 ntBASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AL138831.2-201ENST00000606564 490 ntBASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 IGHV3-41-201ENST00000613121 348 ntBASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49BA6NDI0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
TRIM49BA6NDI0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM49BA6NDI0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM49BA6NDI0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 KRT8P26-201ENST00000534154 1276 ntBASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 AC109462.3-201ENST00000573934 613 ntBASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 AC016396.2-201ENST00000562575 1417 ntBASIC19.33■□□□□ 0.68
TRIM49BA6NDI0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49BA6NDI0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms