Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PALM3A6NDB9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
PALM3A6NDB9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 AC012640.2-201ENST00000561606 901 ntBASIC20.24■□□□□ 0.83
PALM3A6NDB9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.24■□□□□ 0.83
PALM3A6NDB9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PALM3A6NDB9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PALM3A6NDB9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PALM3A6NDB9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PALM3A6NDB9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PALM3A6NDB9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PALM3A6NDB9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PALM3A6NDB9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PALM3A6NDB9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PALM3A6NDB9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 AL589182.2-201ENST00000619332 1049 ntBASIC20.23■□□□□ 0.83
PALM3A6NDB9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PALM3A6NDB9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PALM3A6NDB9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 LAGE3P1-201ENST00000425356 484 ntBASIC20.22■□□□□ 0.83
PALM3A6NDB9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 AC020763.4-201ENST00000623414 4170 ntBASIC20.22■□□□□ 0.83
PALM3A6NDB9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 AL135999.2-201ENST00000622438 1686 ntBASIC20.22■□□□□ 0.83
PALM3A6NDB9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PALM3A6NDB9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PALM3A6NDB9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PALM3A6NDB9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PALM3A6NDB9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PALM3A6NDB9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms