Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC005915.1-201ENST00000624912 2018 ntBASIC17.69■□□□□ 0.42
TCRBV9S1A1TA0A576 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV9S1A1TA0A576 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV9S1A1TA0A576 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TCRBV9S1A1TA0A576 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV9S1A1TA0A576 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV9S1A1TA0A576 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 PCDHA14-201ENST00000506751 2298 ntBASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 ATP5G1P1-201ENST00000448724 379 ntBASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 AC002558.1-201ENST00000488906 803 ntBASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 ZNF444P1-201ENST00000559497 298 ntBASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 GPR32P1-201ENST00000601788 811 ntBASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 LINC02012-201ENST00000608206 1725 ntBASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 FLJ38576-201ENST00000623820 2459 ntBASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV9S1A1TA0A576 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV9S1A1TA0A576 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 AC010460.3-201ENST00000511359 1579 ntBASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 YBX1P2-201ENST00000489612 999 ntBASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 AC139887.4-201ENST00000607877 719 ntBASIC17.66■□□□□ 0.42
TCRBV9S1A1TA0A576 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms