Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.85■□□□□ 0.45
TCRBV7S3A2A0A539 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 RN7SL606P-201ENST00000472779 293 ntBASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 AC002558.1-201ENST00000488906 803 ntBASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 LINC01023-201ENST00000606054 436 ntBASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 TNRC18P3-201ENST00000441896 2691 ntBASIC17.84■□□□□ 0.45
TCRBV7S3A2A0A539 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 BCL2-203ENST00000589955 5011 ntBASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 AC005915.1-201ENST00000624912 2018 ntBASIC17.83■□□□□ 0.45
TCRBV7S3A2A0A539 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 AL671277.2-201ENST00000458060 996 ntBASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 AC022616.7-201ENST00000525383 220 ntBASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 RN7SL850P-201ENST00000579959 291 ntBASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TCRBV7S3A2A0A539 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 FLJ38576-201ENST00000623820 2459 ntBASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms