Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 CRYGEP-201ENST00000412192 528 ntBASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 DNAJB3-201ENST00000446806 729 ntBASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 AC108073.2-201ENST00000464002 357 ntBASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 AC002347.1-201ENST00000569543 541 ntBASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 MIR4751-201ENST00000578027 74 ntBASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 AL805961.1-202ENST00000641562 540 ntBASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV19A0A0A6YYK7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 LINC00982-205ENST00000420957 435 ntBASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 IGHV3-65-201ENST00000523210 341 ntBASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV19A0A0A6YYK7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 GPR89P-201ENST00000407924 1495 ntBASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 YBX2P1-201ENST00000394192 760 ntBASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 UPF3AP3-201ENST00000420996 769 ntBASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 MIR3687-2-201ENST00000577708 61 ntBASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 AC010327.4-202ENST00000591484 748 ntBASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 AL353135.1-201ENST00000606729 504 ntBASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 MIR3687-1-201ENST00000614492 61 ntBASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV19A0A0A6YYK7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV19A0A0A6YYK7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms