Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 LINC01568-207ENST00000641790 1380 ntBASIC14.73□□□□□ -0.05
TRBV6-7A0A0A0MS04 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 KRT18P22-201ENST00000402024 1347 ntBASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRBV6-7A0A0A0MS04 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC009154.2-201ENST00000621177 724 ntBASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 AL138966.2-201ENST00000621997 464 ntBASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 PCDHB17P-201ENST00000539533 2393 ntBASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-7A0A0A0MS04 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-7A0A0A0MS04 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-7A0A0A0MS04 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
TRBV6-7A0A0A0MS04 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 RASA4DP-201ENST00000460726 1199 ntBASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms