Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 AL590627.1-203ENST00000421194 1026 ntBASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 AC109462.3-201ENST00000573934 613 ntBASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 AF228730.7-201ENST00000641842 219 ntBASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 HLA-J-201ENST00000462773 1622 ntBASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 AL049757.1-201ENST00000616842 1596 ntBASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 AC133963.1-201ENST00000504166 1679 ntBASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 AC002558.1-201ENST00000488906 803 ntBASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
RAI2Q9Y5P3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 MIR574-201ENST00000385209 96 ntBASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 AC132008.2-207ENST00000454517 770 ntBASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 AL121912.1-201ENST00000603683 238 ntBASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAI2Q9Y5P3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RAI2Q9Y5P3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.77■□□□□ 0.43
RAI2Q9Y5P3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RAI2Q9Y5P3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RAI2Q9Y5P3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RAI2Q9Y5P3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAI2Q9Y5P3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.77■□□□□ 0.43
RAI2Q9Y5P3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAI2Q9Y5P3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAI2Q9Y5P3 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAI2Q9Y5P3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms