Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 KRT18P13-201ENST00000400056 1290 ntBASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 AP001269.4-201ENST00000609611 512 ntBASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 MIR7706-201ENST00000613747 67 ntBASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA3Q9Y5H0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA3Q9Y5H0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 AC139530.3-201ENST00000620344 690 ntBASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 AP005117.1-201ENST00000584346 1413 ntBASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGA3Q9Y5H0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms