Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 AC106820.2-201ENST00000563775 3264 ntBASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 AL645929.1-201ENST00000420084 975 ntBASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 ATP5G2P1-201ENST00000433580 426 ntBASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 SPDYE13P-201ENST00000445314 798 ntBASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 AC133963.1-201ENST00000504166 1679 ntBASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB3Q9Y5G1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.71■□□□□ 0.26
PCDHGB3Q9Y5G1 AC124067.4-201ENST00000519691 2379 ntBASIC16.71■□□□□ 0.26
PCDHGB3Q9Y5G1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 AP003733.1-201ENST00000491725 852 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms