Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 AC004706.3-202ENST00000621574 984 ntBASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NCKAP1Q9Y2A7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 REXO1L9P-201ENST00000604264 2108 ntBASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 AC009949.1-201ENST00000623048 1830 ntBASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 AC019129.2-201ENST00000609837 1235 ntBASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.59■□□□□ 0.41
NCKAP1Q9Y2A7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 AC093503.3-201ENST00000624917 2352 ntBASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
NCKAP1Q9Y2A7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 MYCLP1-201ENST00000372451 1075 ntBASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 AC007967.2-201ENST00000432613 625 ntBASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 AC108751.1-201ENST00000490852 363 ntBASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 MIR3687-2-201ENST00000577708 61 ntBASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 MIR3687-1-201ENST00000614492 61 ntBASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 AC100803.2-201ENST00000562459 1963 ntBASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.58■□□□□ 0.4
NCKAP1Q9Y2A7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms