Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 SAPCD2P3-201ENST00000455031 850 ntBASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 AC009949.1-201ENST00000623048 1830 ntBASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GTF3C4Q9UKN8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 SIRPAP1-201ENST00000448467 1770 ntBASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 AC007967.3-201ENST00000434308 558 ntBASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 DDX43P3-201ENST00000441064 443 ntBASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 AL138688.1-201ENST00000624851 1594 ntBASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GTF3C4Q9UKN8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 AC141586.5-201ENST00000624546 2050 ntBASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 AC010460.3-201ENST00000511359 1579 ntBASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 AL121912.1-201ENST00000603683 238 ntBASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 FZD10-202ENST00000539839 3282 ntBASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.91■□□□□ 0.62
GTF3C4Q9UKN8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AC096633.1-201ENST00000422446 749 ntBASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AL160237.2-201ENST00000556165 472 ntBASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GTF3C4Q9UKN8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms