Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 AL138831.2-201ENST00000606564 490 ntBASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CDC42EP3Q9UKI2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42EP3Q9UKI2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.71□□□□□ -0.06
CDC42EP3Q9UKI2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42EP3Q9UKI2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42EP3Q9UKI2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42EP3Q9UKI2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42EP3Q9UKI2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 AC211486.1-202ENST00000416371 468 ntBASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 AC211476.1-201ENST00000503899 468 ntBASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42EP3Q9UKI2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 AL357033.4-201ENST00000617703 1807 ntBASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 DNAJB3-202ENST00000449667 1266 ntBASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 AC025062.2-201ENST00000605477 670 ntBASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 AC107918.4-202ENST00000641623 219 ntBASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms