Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 AC008764.6-201ENST00000595909 2069 ntBASIC17.67■□□□□ 0.42
MBD1Q9UIS9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 AC012317.2-201ENST00000623305 2251 ntBASIC17.67■□□□□ 0.42
MBD1Q9UIS9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.67■□□□□ 0.42
MBD1Q9UIS9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD1Q9UIS9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 MCCD1P2-201ENST00000423228 335 ntBASIC17.66■□□□□ 0.42
MBD1Q9UIS9 AP006288.1-201ENST00000446065 395 ntBASIC17.66■□□□□ 0.42
MBD1Q9UIS9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 AL596442.2-201ENST00000610240 980 ntBASIC17.66■□□□□ 0.42
MBD1Q9UIS9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
MBD1Q9UIS9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 AC068880.1-201ENST00000507289 2297 ntBASIC17.65■□□□□ 0.42
MBD1Q9UIS9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 AL589182.2-201ENST00000619332 1049 ntBASIC17.65■□□□□ 0.42
MBD1Q9UIS9 AC004706.3-202ENST00000621574 984 ntBASIC17.65■□□□□ 0.42
MBD1Q9UIS9 AC092865.6-201ENST00000642101 219 ntBASIC17.65■□□□□ 0.42
MBD1Q9UIS9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 AC020763.4-201ENST00000623414 4170 ntBASIC17.65■□□□□ 0.42
MBD1Q9UIS9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 AC006504.4-201ENST00000592118 1568 ntBASIC17.65■□□□□ 0.42
MBD1Q9UIS9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MBD1Q9UIS9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
MBD1Q9UIS9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD1Q9UIS9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD1Q9UIS9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD1Q9UIS9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms