Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
FBXO40Q9UH90 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FBXO40Q9UH90 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
FBXO40Q9UH90 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FBXO40Q9UH90 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FBXO40Q9UH90 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 C20orf181-201ENST00000623918 480 ntBASIC19.89■□□□□ 0.77
FBXO40Q9UH90 AC092865.6-201ENST00000642101 219 ntBASIC19.89■□□□□ 0.77
FBXO40Q9UH90 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO40Q9UH90 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 IGLL3P-201ENST00000412472 434 ntBASIC19.88■□□□□ 0.77
FBXO40Q9UH90 DNAJB3-202ENST00000449667 1266 ntBASIC19.88■□□□□ 0.77
FBXO40Q9UH90 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 AC096734.2-201ENST00000562054 433 ntBASIC19.88■□□□□ 0.77
FBXO40Q9UH90 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FBXO40Q9UH90 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 MKNK2P1-201ENST00000437526 628 ntBASIC19.87■□□□□ 0.77
FBXO40Q9UH90 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FBXO40Q9UH90 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
FBXO40Q9UH90 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms