Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAP1Q9NZP6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAP1Q9NZP6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAP1Q9NZP6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAP1Q9NZP6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPAP1Q9NZP6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.06■□□□□ 0.16
NPAP1Q9NZP6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPAP1Q9NZP6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAP1Q9NZP6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 MIR662-201ENST00000384847 95 ntBASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 PVRIG2P-201ENST00000435460 978 ntBASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 KRT18P41-201ENST00000518924 1277 ntBASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 MIR3180-4-201ENST00000582223 153 ntBASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 AC011498.5-201ENST00000592027 486 ntBASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAP1Q9NZP6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 AC105020.1-201ENST00000435356 2205 ntBASIC16.03■□□□□ 0.16
NPAP1Q9NZP6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms