Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 RCN1P1-201ENST00000400413 996 ntBASIC16.4■□□□□ 0.22
RLIMQ9NVW2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 AC112698.1-201ENST00000510299 916 ntBASIC16.4■□□□□ 0.22
RLIMQ9NVW2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 RN7SL850P-201ENST00000579959 291 ntBASIC16.4■□□□□ 0.22
RLIMQ9NVW2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RLIMQ9NVW2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.4■□□□□ 0.22
RLIMQ9NVW2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RLIMQ9NVW2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RLIMQ9NVW2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RLIMQ9NVW2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 AC106886.4-201ENST00000623557 2502 ntBASIC16.39■□□□□ 0.21
RLIMQ9NVW2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 SPDYE13P-201ENST00000445314 798 ntBASIC16.39■□□□□ 0.21
RLIMQ9NVW2 AC063952.2-201ENST00000498792 1227 ntBASIC16.39■□□□□ 0.21
RLIMQ9NVW2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 RNF126P1-202ENST00000569893 925 ntBASIC16.39■□□□□ 0.21
RLIMQ9NVW2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 AC005332.3-201ENST00000589904 676 ntBASIC16.39■□□□□ 0.21
RLIMQ9NVW2 GPR32P1-201ENST00000601788 811 ntBASIC16.39■□□□□ 0.21
RLIMQ9NVW2 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.39■□□□□ 0.21
RLIMQ9NVW2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RLIMQ9NVW2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms