Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 AC016180.1-201ENST00000567945 403 ntBASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 AP005242.2-201ENST00000580065 1175 ntBASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 AC233702.5-201ENST00000584107 538 ntBASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 Z99916.2-201ENST00000604037 246 ntBASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 LINC00304-203ENST00000565008 1864 ntBASIC21.2■□□□□ 0.98
FOXD4L1Q9NU39 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 RBM17P1-201ENST00000453646 1190 ntBASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 AC006927.4-201ENST00000639187 543 ntBASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 AL138688.1-201ENST00000624851 1594 ntBASIC21.19■□□□□ 0.98
FOXD4L1Q9NU39 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 AC009949.1-201ENST00000623048 1830 ntBASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 BNIP3P35-201ENST00000604530 490 ntBASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 AC024243.1-201ENST00000609234 778 ntBASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 AC022079.1-201ENST00000621546 602 ntBASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 AC092338.2-201ENST00000568827 1415 ntBASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXD4L1Q9NU39 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXD4L1Q9NU39 AC106886.4-201ENST00000623557 2502 ntBASIC21.17■□□□□ 0.98
FOXD4L1Q9NU39 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.17■□□□□ 0.98
FOXD4L1Q9NU39 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXD4L1Q9NU39 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
FOXD4L1Q9NU39 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXD4L1Q9NU39 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.17■□□□□ 0.98
FOXD4L1Q9NU39 TSPY7P-201ENST00000431358 1114 ntBASIC21.17■□□□□ 0.98
FOXD4L1Q9NU39 AC007663.1-201ENST00000438948 1240 ntBASIC21.17■□□□□ 0.98
FOXD4L1Q9NU39 TSPY17P-201ENST00000450329 467 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms