Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 FAM220CP-201ENST00000395253 831 ntBASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.31■□□□□ 0.84
BRMS1Q9HCU9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 AL138688.1-201ENST00000624851 1594 ntBASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 MINOS1P3-201ENST00000457048 203 ntBASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 AC002558.1-201ENST00000488906 803 ntBASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.3■□□□□ 0.84
BRMS1Q9HCU9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 ATP5G2P1-201ENST00000433580 426 ntBASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 KRT17P6-201ENST00000453795 1220 ntBASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 AP005901.3-202ENST00000581653 237 ntBASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 AC093458.2-201ENST00000623150 629 ntBASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRMS1Q9HCU9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 AC091607.1-201ENST00000490318 1060 ntBASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 AC122714.2-201ENST00000502787 707 ntBASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms