Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 LINC00982-205ENST00000420957 435 ntBASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 AP002414.3-201ENST00000589352 1468 ntBASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 AC067852.2-201ENST00000590513 2313 ntBASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 AL133373.2-201ENST00000623187 2828 ntBASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 AC018470.1-201ENST00000624790 3129 ntBASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 AL138688.1-201ENST00000624851 1594 ntBASIC18.3■□□□□ 0.52
CSNK1G1Q9HCP0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 AC092910.1-201ENST00000482027 1129 ntBASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 AL356488.2-201ENST00000602755 427 ntBASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 AC006504.4-201ENST00000592118 1568 ntBASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G1Q9HCP0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 AC098831.1-202ENST00000438821 336 ntBASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 AC136632.2-201ENST00000512891 861 ntBASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms