Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 KRT18P56-201ENST00000507275 550 ntBASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 AC005104.2-201ENST00000427818 678 ntBASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 AL121894.2-201ENST00000602977 491 ntBASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 AL358472.4-201ENST00000633140 710 ntBASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF3BQ9BZI7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 AC096633.1-201ENST00000422446 749 ntBASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF3BQ9BZI7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 TSPY22P-201ENST00000427496 604 ntBASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UPF3BQ9BZI7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF3BQ9BZI7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms