Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 AL391807.1-203ENST00000604392 2365 ntBASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 AGGF1P2-201ENST00000426656 2106 ntBASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 RASA4DP-201ENST00000460726 1199 ntBASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 AC034232.1-201ENST00000506026 1064 ntBASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 AL136038.4-201ENST00000603606 1261 ntBASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDHD3Q9BSH5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDHD3Q9BSH5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 KRT89P-201ENST00000620027 1478 ntBASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms