Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 AC104390.1-201ENST00000555663 520 ntBASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 AC116407.4-201ENST00000623319 1061 ntBASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 PKD1P1-201ENST00000458669 6805 ntBASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 KRT18P55-202ENST00000578578 1546 ntBASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBA1CQ9BQE3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TUBA1CQ9BQE3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.64■□□□□ 0.26
TUBA1CQ9BQE3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TUBA1CQ9BQE3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TUBA1CQ9BQE3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 AC010240.3-201ENST00000607688 395 ntBASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TUBA1CQ9BQE3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 AC008894.3-201ENST00000624324 3103 ntBASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 AC079602.3-201ENST00000623931 403 ntBASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA1CQ9BQE3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBA1CQ9BQE3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1CQ9BQE3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1CQ9BQE3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1CQ9BQE3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1CQ9BQE3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TUBA1CQ9BQE3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1CQ9BQE3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA1CQ9BQE3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBA1CQ9BQE3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms