Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.4■□□□□ 0.54
SMOQ99835 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.4■□□□□ 0.54
SMOQ99835 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.4■□□□□ 0.54
SMOQ99835 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.4■□□□□ 0.54
SMOQ99835 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SMOQ99835 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.4■□□□□ 0.54
SMOQ99835 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SMOQ99835 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMOQ99835 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.4■□□□□ 0.54
SMOQ99835 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMOQ99835 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.54
SMOQ99835 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMOQ99835 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.39■□□□□ 0.54
SMOQ99835 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMOQ99835 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
SMOQ99835 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.39■□□□□ 0.53
SMOQ99835 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.39■□□□□ 0.53
SMOQ99835 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.39■□□□□ 0.53
SMOQ99835 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.39■□□□□ 0.53
SMOQ99835 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.39■□□□□ 0.53
SMOQ99835 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.39■□□□□ 0.53
SMOQ99835 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.39■□□□□ 0.53
SMOQ99835 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.39■□□□□ 0.53
SMOQ99835 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SMOQ99835 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.39■□□□□ 0.53
SMOQ99835 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.39■□□□□ 0.53
SMOQ99835 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
SMOQ99835 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.39■□□□□ 0.53
SMOQ99835 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.39■□□□□ 0.53
SMOQ99835 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMOQ99835 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.39■□□□□ 0.53
SMOQ99835 AC046185.3-201ENST00000623228 1824 ntBASIC18.39■□□□□ 0.53
SMOQ99835 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
SMOQ99835 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SMOQ99835 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.39■□□□□ 0.53
SMOQ99835 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.39■□□□□ 0.53
SMOQ99835 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMOQ99835 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SMOQ99835 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.38■□□□□ 0.53
SMOQ99835 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMOQ99835 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMOQ99835 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SMOQ99835 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 LAGE3P1-201ENST00000425356 484 ntBASIC18.38■□□□□ 0.53
SMOQ99835 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.38■□□□□ 0.53
SMOQ99835 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.38■□□□□ 0.53
SMOQ99835 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.38■□□□□ 0.53
SMOQ99835 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.38■□□□□ 0.53
SMOQ99835 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SMOQ99835 AC008735.5-201ENST00000623544 497 ntBASIC18.38■□□□□ 0.53
SMOQ99835 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMOQ99835 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMOQ99835 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.38■□□□□ 0.53
SMOQ99835 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMOQ99835 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.38■□□□□ 0.53
SMOQ99835 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SMOQ99835 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.38■□□□□ 0.53
SMOQ99835 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SMOQ99835 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms