Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC009533.2-201ENST00000543664 586 ntBASIC16.03■□□□□ 0.16
NPAS1Q99742 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.03■□□□□ 0.16
NPAS1Q99742 PRELID1P1-202ENST00000567272 903 ntBASIC16.03■□□□□ 0.16
NPAS1Q99742 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.03■□□□□ 0.16
NPAS1Q99742 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS1Q99742 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.03■□□□□ 0.16
NPAS1Q99742 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS1Q99742 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS1Q99742 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NPAS1Q99742 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS1Q99742 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS1Q99742 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAS1Q99742 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS1Q99742 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS1Q99742 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS1Q99742 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NPAS1Q99742 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
NPAS1Q99742 LINC00304-203ENST00000565008 1864 ntBASIC16.02■□□□□ 0.16
NPAS1Q99742 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS1Q99742 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS1Q99742 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 COX5BP2-201ENST00000392354 334 ntBASIC16.02■□□□□ 0.16
NPAS1Q99742 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 TSPY19P-201ENST00000418461 509 ntBASIC16.02■□□□□ 0.16
NPAS1Q99742 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS1Q99742 TSPY18P-201ENST00000441642 509 ntBASIC16.02■□□□□ 0.16
NPAS1Q99742 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS1Q99742 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS1Q99742 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.02■□□□□ 0.16
NPAS1Q99742 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS1Q99742 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.02■□□□□ 0.16
NPAS1Q99742 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NPAS1Q99742 AC116407.2-201ENST00000613639 860 ntBASIC16.02■□□□□ 0.16
NPAS1Q99742 AC114341.1-201ENST00000618070 349 ntBASIC16.02■□□□□ 0.16
NPAS1Q99742 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS1Q99742 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
NPAS1Q99742 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
NPAS1Q99742 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.02■□□□□ 0.15
NPAS1Q99742 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 PP12613-201ENST00000424958 2230 ntBASIC16.02■□□□□ 0.15
NPAS1Q99742 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
NPAS1Q99742 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.02■□□□□ 0.15
NPAS1Q99742 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS1Q99742 GNAS-203ENST00000306120 1878 ntBASIC16.01■□□□□ 0.15
NPAS1Q99742 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 LINC00896-202ENST00000609602 2128 ntBASIC16.01■□□□□ 0.15
NPAS1Q99742 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
NPAS1Q99742 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NPAS1Q99742 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS1Q99742 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.01■□□□□ 0.15
NPAS1Q99742 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS1Q99742 KRT18P31-201ENST00000506277 1292 ntBASIC16.01■□□□□ 0.15
NPAS1Q99742 MIR5100-201ENST00000579544 119 ntBASIC16.01■□□□□ 0.15
NPAS1Q99742 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.01■□□□□ 0.15
NPAS1Q99742 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
NPAS1Q99742 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS1Q99742 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NPAS1Q99742 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS1Q99742 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS1Q99742 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NPAS1Q99742 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS1Q99742 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS1Q99742 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16■□□□□ 0.15
NPAS1Q99742 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS1Q99742 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
NPAS1Q99742 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16■□□□□ 0.15
NPAS1Q99742 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS1Q99742 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS1Q99742 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS1Q99742 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16■□□□□ 0.15
NPAS1Q99742 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS1Q99742 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms