Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
MUC4Q99102 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
MUC4Q99102 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
MUC4Q99102 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.86□□□□□ -0.35
MUC4Q99102 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
MUC4Q99102 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.86□□□□□ -0.35
MUC4Q99102 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
MUC4Q99102 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.86□□□□□ -0.35
MUC4Q99102 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
MUC4Q99102 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.86□□□□□ -0.35
MUC4Q99102 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.86□□□□□ -0.35
MUC4Q99102 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MUC4Q99102 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
MUC4Q99102 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 AL121761.2-201ENST00000598007 1648 ntBASIC12.85□□□□□ -0.35
MUC4Q99102 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.85□□□□□ -0.35
MUC4Q99102 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 BX276092.7-203ENST00000637198 1536 ntBASIC12.85□□□□□ -0.35
MUC4Q99102 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 KRT18P65-201ENST00000439811 1286 ntBASIC12.85□□□□□ -0.35
MUC4Q99102 AC112907.2-201ENST00000448639 330 ntBASIC12.85□□□□□ -0.35
MUC4Q99102 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.85□□□□□ -0.35
MUC4Q99102 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.85□□□□□ -0.35
MUC4Q99102 AL031432.5-201ENST00000641059 760 ntBASIC12.85□□□□□ -0.35
MUC4Q99102 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.85□□□□□ -0.35
MUC4Q99102 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.85□□□□□ -0.35
MUC4Q99102 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MUC4Q99102 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.85□□□□□ -0.35
MUC4Q99102 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MUC4Q99102 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MUC4Q99102 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MUC4Q99102 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MUC4Q99102 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 PCED1CP-201ENST00000419887 785 ntBASIC12.84□□□□□ -0.35
MUC4Q99102 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.84□□□□□ -0.35
MUC4Q99102 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.84□□□□□ -0.35
MUC4Q99102 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.84□□□□□ -0.35
MUC4Q99102 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.84□□□□□ -0.35
MUC4Q99102 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
MUC4Q99102 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
MUC4Q99102 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
MUC4Q99102 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
MUC4Q99102 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 AC005332.1-201ENST00000577698 1310 ntBASIC12.84□□□□□ -0.35
MUC4Q99102 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
MUC4Q99102 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms