Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 AL603756.1-201ENST00000606511 2163 ntBASIC14.29□□□□□ -0.12
RAB40CQ96S21 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 AC116562.2-201ENST00000507042 360 ntBASIC14.28□□□□□ -0.12
RAB40CQ96S21 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB40CQ96S21 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
RAB40CQ96S21 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40CQ96S21 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40CQ96S21 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40CQ96S21 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB40CQ96S21 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB40CQ96S21 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 AL355355.2-201ENST00000442321 338 ntBASIC14.27□□□□□ -0.13
RAB40CQ96S21 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40CQ96S21 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 AP001412.1-201ENST00000608405 714 ntBASIC14.27□□□□□ -0.13
RAB40CQ96S21 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40CQ96S21 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40CQ96S21 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40CQ96S21 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40CQ96S21 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB40CQ96S21 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.27□□□□□ -0.13
RAB40CQ96S21 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40CQ96S21 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40CQ96S21 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB40CQ96S21 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 AC116353.5-201ENST00000638148 1699 ntBASIC14.26□□□□□ -0.13
RAB40CQ96S21 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms