Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AC010240.3-201ENST00000607688 395 ntBASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 NSUN5P1-202ENST00000421140 1535 ntBASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 NSUN5P2-203ENST00000457352 1529 ntBASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 AL023806.1-201ENST00000603994 1649 ntBASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 FAM220CP-201ENST00000395253 831 ntBASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 AL031284.1-201ENST00000419297 478 ntBASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 AL592071.1-201ENST00000611956 408 ntBASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RPGRIP1Q96KN7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.39■□□□□ 0.7
RPGRIP1Q96KN7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.39■□□□□ 0.7
RPGRIP1Q96KN7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.39■□□□□ 0.7
RPGRIP1Q96KN7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPGRIP1Q96KN7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 GUSBP12-201ENST00000513727 720 ntBASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 GPR32P1-201ENST00000601788 811 ntBASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 TERC-201ENST00000602385 541 ntBASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 PP12613-201ENST00000424958 2230 ntBASIC19.39■□□□□ 0.69
RPGRIP1Q96KN7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 VENTXP7-201ENST00000475503 772 ntBASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.38■□□□□ 0.69
RPGRIP1Q96KN7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPGRIP1Q96KN7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms