Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE2Q96FN4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 AC100803.2-201ENST00000562459 1963 ntBASIC15.31■□□□□ 0.04
CPNE2Q96FN4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 ECEL1P2-202ENST00000465689 757 ntBASIC15.31■□□□□ 0.04
CPNE2Q96FN4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 AL157888.1-201ENST00000631930 593 ntBASIC15.31■□□□□ 0.04
CPNE2Q96FN4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 CYP2D8P-201ENST00000433633 1490 ntBASIC15.31■□□□□ 0.04
CPNE2Q96FN4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 LINC00304-203ENST00000565008 1864 ntBASIC15.31■□□□□ 0.04
CPNE2Q96FN4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CPNE2Q96FN4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms