Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 NEK4P2-201ENST00000580004 1012 ntBASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 AC024243.1-201ENST00000609234 778 ntBASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
FOXRED1Q96CU9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 AL118508.1-201ENST00000613502 2345 ntBASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 AL137013.1-201ENST00000432946 1228 ntBASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXRED1Q96CU9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms