Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 RN7SL589P-201ENST00000481268 310 ntBASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 AL135744.1-201ENST00000565098 629 ntBASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 AC140878.1-201ENST00000565277 250 ntBASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM43Q96BQ3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 AC008677.1-201ENST00000519230 1561 ntBASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM43Q96BQ3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM43Q96BQ3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 OR8S1-201ENST00000310194 1080 ntBASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 HLA-V-201ENST00000429037 534 ntBASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 SPCS2P4-201ENST00000436160 681 ntBASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 CRB3P1-201ENST00000449338 276 ntBASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 AC002558.1-201ENST00000488906 803 ntBASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 IGHV3-42-201ENST00000520410 361 ntBASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 AC116407.2-201ENST00000613639 860 ntBASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms