Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RNF34Q969K3 AC011467.2-201ENST00000598425 242 ntBASIC18.42■□□□□ 0.54
RNF34Q969K3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF34Q969K3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF34Q969K3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
RNF34Q969K3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF34Q969K3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF34Q969K3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF34Q969K3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF34Q969K3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF34Q969K3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF34Q969K3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF34Q969K3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF34Q969K3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF34Q969K3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF34Q969K3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF34Q969K3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 AC134043.2-201ENST00000624206 2238 ntBASIC18.41■□□□□ 0.54
RNF34Q969K3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF34Q969K3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF34Q969K3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 COX5BP2-201ENST00000392354 334 ntBASIC18.41■□□□□ 0.54
RNF34Q969K3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF34Q969K3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF34Q969K3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF34Q969K3 KRT126P-201ENST00000549467 1181 ntBASIC18.41■□□□□ 0.54
RNF34Q969K3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF34Q969K3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF34Q969K3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.41■□□□□ 0.54
RNF34Q969K3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF34Q969K3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF34Q969K3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RNF34Q969K3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF34Q969K3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF34Q969K3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF34Q969K3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF34Q969K3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RNF34Q969K3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF34Q969K3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 KRT18P31-201ENST00000506277 1292 ntBASIC18.4■□□□□ 0.54
RNF34Q969K3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF34Q969K3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF34Q969K3 AL732292.2-201ENST00000609649 430 ntBASIC18.4■□□□□ 0.54
RNF34Q969K3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF34Q969K3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF34Q969K3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF34Q969K3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF34Q969K3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF34Q969K3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.39■□□□□ 0.54
RNF34Q969K3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.39■□□□□ 0.54
RNF34Q969K3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF34Q969K3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF34Q969K3 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF34Q969K3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RNF34Q969K3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF34Q969K3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF34Q969K3 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF34Q969K3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF34Q969K3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF34Q969K3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF34Q969K3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF34Q969K3 AL450487.1-201ENST00000426799 995 ntBASIC18.39■□□□□ 0.53
RNF34Q969K3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF34Q969K3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF34Q969K3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms