Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC22.91■■□□□ 1.26
RTF1Q92541 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.91■■□□□ 1.26
RTF1Q92541 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
RTF1Q92541 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.91■■□□□ 1.26
RTF1Q92541 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.91■■□□□ 1.26
RTF1Q92541 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.91■■□□□ 1.26
RTF1Q92541 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.91■■□□□ 1.26
RTF1Q92541 AC117500.6-201ENST00000624871 588 ntBASIC22.91■■□□□ 1.26
RTF1Q92541 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.91■■□□□ 1.26
RTF1Q92541 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.91■■□□□ 1.26
RTF1Q92541 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.91■■□□□ 1.26
RTF1Q92541 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.91■■□□□ 1.26
RTF1Q92541 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.91■■□□□ 1.26
RTF1Q92541 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.91■■□□□ 1.26
RTF1Q92541 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTF1Q92541 NCF1C-201ENST00000438382 1427 ntBASIC22.91■■□□□ 1.26
RTF1Q92541 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTF1Q92541 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTF1Q92541 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.9■■□□□ 1.26
RTF1Q92541 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.9■■□□□ 1.26
RTF1Q92541 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RTF1Q92541 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RTF1Q92541 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.9■■□□□ 1.26
RTF1Q92541 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.9■■□□□ 1.26
RTF1Q92541 AC004706.3-202ENST00000621574 984 ntBASIC22.9■■□□□ 1.26
RTF1Q92541 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.9■■□□□ 1.26
RTF1Q92541 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTF1Q92541 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTF1Q92541 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTF1Q92541 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
RTF1Q92541 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTF1Q92541 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
RTF1Q92541 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
RTF1Q92541 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.89■■□□□ 1.26
RTF1Q92541 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
RTF1Q92541 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RTF1Q92541 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RTF1Q92541 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RTF1Q92541 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
RTF1Q92541 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTF1Q92541 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTF1Q92541 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RTF1Q92541 MIR940-201ENST00000401276 94 ntBASIC22.89■■□□□ 1.25
RTF1Q92541 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.89■■□□□ 1.25
RTF1Q92541 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.89■■□□□ 1.25
RTF1Q92541 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC22.89■■□□□ 1.25
RTF1Q92541 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
RTF1Q92541 Z83851.2-201ENST00000609564 659 ntBASIC22.89■■□□□ 1.25
RTF1Q92541 AC005593.1-201ENST00000624894 515 ntBASIC22.89■■□□□ 1.25
RTF1Q92541 PGM5P2-202ENST00000637225 1043 ntBASIC22.89■■□□□ 1.25
RTF1Q92541 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.89■■□□□ 1.25
RTF1Q92541 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTF1Q92541 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
RTF1Q92541 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
RTF1Q92541 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTF1Q92541 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RTF1Q92541 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTF1Q92541 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTF1Q92541 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.89■■□□□ 1.25
RTF1Q92541 GID4-202ENST00000376345 1391 ntTSL 3 BASIC22.89■■□□□ 1.25
RTF1Q92541 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTF1Q92541 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.88■■□□□ 1.25
RTF1Q92541 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTF1Q92541 REXO1L11P-201ENST00000620964 1927 ntBASIC22.88■■□□□ 1.25
RTF1Q92541 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RTF1Q92541 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.88■■□□□ 1.25
RTF1Q92541 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTF1Q92541 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTF1Q92541 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.88■■□□□ 1.25
RTF1Q92541 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTF1Q92541 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTF1Q92541 AC073621.1-201ENST00000392730 636 ntBASIC22.88■■□□□ 1.25
RTF1Q92541 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC22.88■■□□□ 1.25
RTF1Q92541 AC136632.2-201ENST00000512891 861 ntBASIC22.88■■□□□ 1.25
RTF1Q92541 UNC93B6-202ENST00000528242 690 ntBASIC22.88■■□□□ 1.25
RTF1Q92541 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.88■■□□□ 1.25
RTF1Q92541 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
RTF1Q92541 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTF1Q92541 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.88■■□□□ 1.25
RTF1Q92541 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
RTF1Q92541 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.88■■□□□ 1.25
RTF1Q92541 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.88■■□□□ 1.25
RTF1Q92541 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTF1Q92541 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTF1Q92541 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTF1Q92541 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTF1Q92541 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.87■■□□□ 1.25
RTF1Q92541 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RTF1Q92541 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms