Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.67■□□□□ 0.9
STAG1Q8WVM7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 KRT18P67-201ENST00000432816 1264 ntBASIC20.67■□□□□ 0.9
STAG1Q8WVM7 AP000347.1-202ENST00000435868 847 ntBASIC20.67■□□□□ 0.9
STAG1Q8WVM7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 BX005266.1-201ENST00000473402 457 ntBASIC20.67■□□□□ 0.9
STAG1Q8WVM7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 AC021087.4-201ENST00000563761 564 ntBASIC20.67■□□□□ 0.9
STAG1Q8WVM7 AC004817.3-201ENST00000602957 2129 ntBASIC20.67■□□□□ 0.9
STAG1Q8WVM7 LINC00896-202ENST00000609602 2128 ntBASIC20.67■□□□□ 0.9
STAG1Q8WVM7 AL773604.1-201ENST00000617417 272 ntBASIC20.67■□□□□ 0.9
STAG1Q8WVM7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
STAG1Q8WVM7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 AF186996.4-201ENST00000467186 377 ntBASIC20.66■□□□□ 0.9
STAG1Q8WVM7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 AC025062.2-201ENST00000605477 670 ntBASIC20.66■□□□□ 0.9
STAG1Q8WVM7 AC148477.8-201ENST00000624298 468 ntBASIC20.66■□□□□ 0.9
STAG1Q8WVM7 AL022326.1-202ENST00000641533 845 ntBASIC20.66■□□□□ 0.9
STAG1Q8WVM7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 AL138688.1-201ENST00000624851 1594 ntBASIC20.66■□□□□ 0.9
STAG1Q8WVM7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 AC046185.3-201ENST00000623228 1824 ntBASIC20.66■□□□□ 0.9
STAG1Q8WVM7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
STAG1Q8WVM7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 AC018712.1-201ENST00000455767 687 ntBASIC20.65■□□□□ 0.9
STAG1Q8WVM7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 RNPS1P1-201ENST00000507437 918 ntBASIC20.65■□□□□ 0.9
STAG1Q8WVM7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 AP001005.1-201ENST00000571755 1248 ntBASIC20.65■□□□□ 0.9
STAG1Q8WVM7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.65■□□□□ 0.9
STAG1Q8WVM7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
STAG1Q8WVM7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms