Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 KRT17P6-201ENST00000453795 1220 ntBASIC17.82■□□□□ 0.44
PTCD2Q8WV60 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 AC012615.1-201ENST00000565797 1299 ntBASIC17.82■□□□□ 0.44
PTCD2Q8WV60 AC060766.1-201ENST00000590824 627 ntBASIC17.82■□□□□ 0.44
PTCD2Q8WV60 AC138894.3-201ENST00000603787 634 ntBASIC17.82■□□□□ 0.44
PTCD2Q8WV60 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 OR13I1P-201ENST00000609811 1264 ntBASIC17.82■□□□□ 0.44
PTCD2Q8WV60 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PTCD2Q8WV60 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 NUS1P1-201ENST00000446295 882 ntBASIC17.81■□□□□ 0.44
PTCD2Q8WV60 AC104819.1-201ENST00000504587 486 ntBASIC17.81■□□□□ 0.44
PTCD2Q8WV60 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 RN7SL371P-201ENST00000578099 267 ntBASIC17.81■□□□□ 0.44
PTCD2Q8WV60 AL353801.3-201ENST00000609898 542 ntBASIC17.81■□□□□ 0.44
PTCD2Q8WV60 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 NSUN5P1-202ENST00000421140 1535 ntBASIC17.81■□□□□ 0.44
PTCD2Q8WV60 NSUN5P2-203ENST00000457352 1529 ntBASIC17.81■□□□□ 0.44
PTCD2Q8WV60 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCD2Q8WV60 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 OR6D1P-202ENST00000641007 5290 ntBASIC17.8■□□□□ 0.44
PTCD2Q8WV60 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 AC005336.2-201ENST00000593183 939 ntBASIC17.8■□□□□ 0.44
PTCD2Q8WV60 AC099336.1-202ENST00000602961 463 ntBASIC17.8■□□□□ 0.44
PTCD2Q8WV60 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.8■□□□□ 0.44
PTCD2Q8WV60 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCD2Q8WV60 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms