Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 AC103564.2-201ENST00000432853 1299 ntBASIC18.48■□□□□ 0.55
RNF139Q8WU17 SAPCD2P3-201ENST00000455031 850 ntBASIC18.48■□□□□ 0.55
RNF139Q8WU17 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 REXO1L6P-202ENST00000619970 1078 ntBASIC18.48■□□□□ 0.55
RNF139Q8WU17 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF139Q8WU17 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF139Q8WU17 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 AL121894.2-201ENST00000602977 491 ntBASIC18.47■□□□□ 0.55
RNF139Q8WU17 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF139Q8WU17 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF139Q8WU17 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 PCDHB18P-201ENST00000524813 2368 ntBASIC18.46■□□□□ 0.55
RNF139Q8WU17 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 ABCD1P5-201ENST00000445663 754 ntBASIC18.46■□□□□ 0.55
RNF139Q8WU17 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF139Q8WU17 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF139Q8WU17 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.46■□□□□ 0.54
RNF139Q8WU17 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF139Q8WU17 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms