Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 AC026120.1-201ENST00000611536 926 ntBASIC21.2■□□□□ 0.98
SNED1Q8TER0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 AF228730.6-201ENST00000641497 218 ntBASIC21.2■□□□□ 0.98
SNED1Q8TER0 AC084121.3-201ENST00000641716 218 ntBASIC21.2■□□□□ 0.98
SNED1Q8TER0 AC105233.6-201ENST00000642093 218 ntBASIC21.2■□□□□ 0.98
SNED1Q8TER0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNED1Q8TER0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SNED1Q8TER0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 TIMM8BP1-201ENST00000452384 211 ntBASIC21.19■□□□□ 0.98
SNED1Q8TER0 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNED1Q8TER0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
SNED1Q8TER0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 MYCLP1-201ENST00000372451 1075 ntBASIC21.18■□□□□ 0.98
SNED1Q8TER0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 AC092474.2-201ENST00000424288 719 ntBASIC21.18■□□□□ 0.98
SNED1Q8TER0 AC067863.1-201ENST00000494933 530 ntBASIC21.18■□□□□ 0.98
SNED1Q8TER0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 AC069262.1-201ENST00000539058 672 ntBASIC21.18■□□□□ 0.98
SNED1Q8TER0 AL512356.2-201ENST00000546955 174 ntBASIC21.18■□□□□ 0.98
SNED1Q8TER0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.18■□□□□ 0.98
SNED1Q8TER0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNED1Q8TER0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.17■□□□□ 0.98
SNED1Q8TER0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.17■□□□□ 0.98
SNED1Q8TER0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 PMS2P4-201ENST00000412466 1052 ntBASIC21.17■□□□□ 0.98
SNED1Q8TER0 FAM58DP-201ENST00000428076 619 ntBASIC21.17■□□□□ 0.98
SNED1Q8TER0 AL513480.1-201ENST00000451731 511 ntBASIC21.17■□□□□ 0.98
SNED1Q8TER0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.17■□□□□ 0.98
SNED1Q8TER0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.17■□□□□ 0.98
SNED1Q8TER0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SNED1Q8TER0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.17■□□□□ 0.98
SNED1Q8TER0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNED1Q8TER0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNED1Q8TER0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNED1Q8TER0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNED1Q8TER0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNED1Q8TER0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNED1Q8TER0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SNED1Q8TER0 AC004408.2-201ENST00000623613 2777 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms