Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNIH3Q8TBE1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 AC104390.1-201ENST00000555663 520 ntBASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 AF186192.3-201ENST00000583427 947 ntBASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 AC073195.1-201ENST00000607241 877 ntBASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 AC078925.2-201ENST00000624013 1973 ntBASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNIH3Q8TBE1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CNIH3Q8TBE1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 CA15P1-201ENST00000481698 905 ntBASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 KRT18P6-201ENST00000555540 1265 ntBASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms