Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTL9Q8NET4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTL9Q8NET4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RTL9Q8NET4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.54■■□□□ 1.04
RTL9Q8NET4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.54■■□□□ 1.04
RTL9Q8NET4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RTL9Q8NET4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 YBX1P5-201ENST00000509441 847 ntBASIC21.54■■□□□ 1.04
RTL9Q8NET4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.54■■□□□ 1.04
RTL9Q8NET4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RTL9Q8NET4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTL9Q8NET4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL9Q8NET4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL9Q8NET4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL9Q8NET4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 LINC01451-201ENST00000623792 534 ntBASIC21.53■■□□□ 1.04
RTL9Q8NET4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTL9Q8NET4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL9Q8NET4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL9Q8NET4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL9Q8NET4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL9Q8NET4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL9Q8NET4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RTL9Q8NET4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 AC010507.1-201ENST00000633895 436 ntBASIC21.52■■□□□ 1.04
RTL9Q8NET4 AC092865.6-201ENST00000642101 219 ntBASIC21.52■■□□□ 1.04
RTL9Q8NET4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 AC046185.3-201ENST00000623228 1824 ntBASIC21.52■■□□□ 1.04
RTL9Q8NET4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.52■■□□□ 1.04
RTL9Q8NET4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTL9Q8NET4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTL9Q8NET4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTL9Q8NET4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTL9Q8NET4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTL9Q8NET4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTL9Q8NET4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTL9Q8NET4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTL9Q8NET4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.51■■□□□ 1.03
RTL9Q8NET4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms