Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 AC024243.1-201ENST00000609234 778 ntBASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 KRT8P9-201ENST00000558927 1449 ntBASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DNAAF1Q8NEP3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 HLA-J-201ENST00000462773 1622 ntBASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 AC106886.4-201ENST00000623557 2502 ntBASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 AC009949.1-201ENST00000623048 1830 ntBASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
DNAAF1Q8NEP3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 AC022898.2-201ENST00000616822 1312 ntBASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 PVRIG2P-201ENST00000435460 978 ntBASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
DNAAF1Q8NEP3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms