Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CCDC168Q8NDH2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC168Q8NDH2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC168Q8NDH2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 AC026150.2-201ENST00000564693 1156 ntBASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 AC017083.2-201ENST00000608069 979 ntBASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 TP53TG3HP-202ENST00000569755 579 ntBASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC168Q8NDH2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms