Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 AC011467.2-201ENST00000598425 242 ntBASIC19.91■□□□□ 0.78
RETREG2Q8NC44 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 ABCD1P5-201ENST00000445663 754 ntBASIC19.9■□□□□ 0.78
RETREG2Q8NC44 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 AC021087.4-201ENST00000563761 564 ntBASIC19.9■□□□□ 0.78
RETREG2Q8NC44 AL138831.2-201ENST00000606564 490 ntBASIC19.9■□□□□ 0.78
RETREG2Q8NC44 AC027601.4-201ENST00000611259 610 ntBASIC19.9■□□□□ 0.78
RETREG2Q8NC44 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.9■□□□□ 0.78
RETREG2Q8NC44 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 AC125634.1-201ENST00000438758 1403 ntBASIC19.89■□□□□ 0.77
RETREG2Q8NC44 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 HLA-J-201ENST00000462773 1622 ntBASIC19.89■□□□□ 0.77
RETREG2Q8NC44 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 AC104109.2-201ENST00000602919 1418 ntBASIC19.89■□□□□ 0.77
RETREG2Q8NC44 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 AC132938.6-201ENST00000623828 1655 ntBASIC19.89■□□□□ 0.77
RETREG2Q8NC44 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RETREG2Q8NC44 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 AC005104.2-201ENST00000427818 678 ntBASIC19.88■□□□□ 0.77
RETREG2Q8NC44 RPS2P1-201ENST00000434010 821 ntBASIC19.88■□□□□ 0.77
RETREG2Q8NC44 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 AC145285.3-201ENST00000564603 959 ntBASIC19.88■□□□□ 0.77
RETREG2Q8NC44 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RETREG2Q8NC44 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms