Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 PCDHB18P-201ENST00000524813 2368 ntBASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 FAM197Y8-203ENST00000450145 560 ntBASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 AC025062.2-201ENST00000605477 670 ntBASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 AC046185.3-201ENST00000623228 1824 ntBASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 PP12613-201ENST00000424958 2230 ntBASIC16.88■□□□□ 0.29
LINC01555Q8NAE3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 MRPL3P1-201ENST00000400109 1033 ntBASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 AC148477.8-201ENST00000624298 468 ntBASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01555Q8NAE3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01555Q8NAE3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms