Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 AP000593.1-201ENST00000393668 712 ntBASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 ZNF736P11Y-201ENST00000442535 1213 ntBASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 ZNF736P12Y-201ENST00000443152 1243 ntBASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 ZNF736P4Y-201ENST00000454995 1243 ntBASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 AL356094.1-201ENST00000624663 1212 ntBASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 AC112497.1-201ENST00000624824 639 ntBASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCAB3Q8N7B9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 KRT18P41-201ENST00000518924 1277 ntBASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 AL441883.1-201ENST00000566170 1045 ntBASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 AL137246.1-201ENST00000607072 977 ntBASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 KRT8P50-201ENST00000562022 1438 ntBASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCAB3Q8N7B9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCAB3Q8N7B9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms